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 External Resources

 gro-2/113044http://resolver.sub.uni-goettingen.de/purl?gro-2/113044  GRO.publications identifier

 7227https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=7227  NCBI taxonomy (Drosophila melanogaster)

 0000-0002-8092-3440https://orcid.org/0000-0002-8092-3440  ORCID identifier (Claire Eschbach)

 0000-0001-9477-3853https://orcid.org/0000-0001-9477-3853  ORCID identifier (Casey M. Schneider-Mizell)

 0000-0002-7833-8621https://orcid.org/0000-0002-7833-8621  ORCID identifier (Katharina Eichler)

 0000-0002-1577-1057https://orcid.org/0000-0002-1577-1057  ORCID identifier (Javier Valdes-Aleman)

 0000-0002-3830-6596https://orcid.org/0000-0002-3830-6596  ORCID identifier (Andreas S. Thum)

 0000-0003-3003-0051https://orcid.org/0000-0003-3003-0051  ORCID identifier (Bertram Gerber)

 0000-0002-1558-100Xhttps://orcid.org/0000-0002-1558-100X  ORCID identifier (Richard D. Fetter)

 0000-0003-2422-6576https://orcid.org/0000-0003-2422-6576  ORCID identifier (Ashok Litwin-Kumar)

 0000-0003-4941-6536https://orcid.org/0000-0003-4941-6536  ORCID identifier (Albert Cardona)

 0000-0002-3149-2250https://orcid.org/0000-0002-3149-2250  ORCID identifier (Marta Zlatic)

 013sk6x84https://ror.org/013sk6x84  ROR identifier (Janelia Research Campus)

 013meh722https://ror.org/013meh722  ROR identifier (University of Cambridge)

 00hj8s172https://ror.org/00hj8s172  ROR identifier (Columbia University)

 00dcv1019https://ror.org/00dcv1019  ROR identifier (Allen Institute for Brain Science)

 00h25w961https://ror.org/00h25w961  ROR identifier (University of Puerto Rico, Medical Sciences Campus)

 01pxwe438https://ror.org/01pxwe438  ROR identifier (McGill University)

 03s7gtk40https://ror.org/03s7gtk40  ROR identifier (Leipzig University)

 00ggpsq73https://ror.org/00ggpsq73  ROR identifier (Otto-von-Guericke University Magdeburg)

 00cvxb145https://ror.org/00cvxb145  ROR identifier (University of Washington)

 static-c...SM.pdfhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41593-020-0607-9/MediaObjects/41593_2020_607_MOESM1_ESM.pdf  Supplemental material (Table 1, legends for Supplementary Adjacency Matrices 1–3, Atlas, Figs. 1–6)

 static-c...SM.ziphttps://static-content.springer.com/esm/art%3A10.1038%2Fs41593-020-0607-9/MediaObjects/41593_2020_607_MOESM6_ESM.zip  Supplemental material (Software)

 static-c...SM.csvhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41593-020-0607-9/MediaObjects/41593_2020_607_MOESM3_ESM.csv  Supplemental material (Supplementary Adjacency Matrix 1)

 static-c...SM.csvhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41593-020-0607-9/MediaObjects/41593_2020_607_MOESM4_ESM.csv  Supplemental material (Supplementary Adjacency Matrix 2)

 static-c...SM.csvhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41593-020-0607-9/MediaObjects/41593_2020_607_MOESM5_ESM.csv  Supplemental material (Supplementary Adjacency Matrix 3)

 static-c...M.xlsxhttps://static-content.springer.com/esm/art%3A10.1038%2Fs41593-020-0607-9/MediaObjects/41593_2020_607_MOESM7_ESM.xlsx  Supplemental material (Source Data Fig. 1)

 l1em.cat...n.org/https://l1em.catmaid.virtualflybrain.org/  Available Data (EM volume of whole CNS, reconstructed neurons and synapses)

 SCR_008954https://scicrunch.org/resolver/SCR_008954  SciCrunch identifier (RRID:SCR_008954, TrakEM2)

 SCR_006278https://scicrunch.org/resolver/SCR_006278  SciCrunch identifier (RRID:SCR_006278, CATMAID)

 SCR_002285https://scicrunch.org/resolver/SCR_002285  SciCrunch identifier (RRID:SCR_002285, Fiji)

 SCR_001622https://scicrunch.org/resolver/SCR_001622  SciCrunch identifier (RRID:SCR_001622, MATLAB)

 BDSC_55134https://scicrunch.org/resolver/BDSC_55134  SciCrunch identifier (RRID:BDSC_55134, Bloomington Drosophila Stock)

 BDSC_55138https://scicrunch.org/resolver/BDSC_55138  SciCrunch identifier (RRID:BDSC_55138, Bloomington Drosophila Stock)

 BDSC_44276https://scicrunch.org/resolver/BDSC_44276  SciCrunch identifier (RRID:BDSC_44276, Bloomington Drosophila Stock)

 Q90591952https://www.wikidata.org/wiki/Q90591952  Wikidata ID